Find other traits with best Spearman correlation with selected traitnames.
Usage
bestcor(traitSignal, traitnames = NULL, term = c("cellmean", "signal"))
is_bestcor(object)
ggplot_bestcor(object, mincor = 0.7, abscor = TRUE, ...)
# S3 method for class 'bestcor'
autoplot(object, ...)
summary_bestcor(object, mincor = 0.5, ...)
# S3 method for class 'bestcor'
summary(object, ...)
Arguments
- traitSignal
data frame from `partition`
- traitnames
names of traits in `traitSignal`
- term
either `signal` or `mean`
- object
object of class `bestcor`
- mincor
minimum correlation to show
- abscor
plot absolute value of correlation if `TRUE`
- ...
not used
Value
sorted vector of absolute correlations with names
logical
ggplot object
data frame
Examples
sampleSignal <- partition(sampleData)
out <- bestcor(sampleSignal, "sample: A")
ggplot_bestcor(out, 0)
ggplot_bestcor(out, 0, abscor = FALSE)
